Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
CDCP1Q9H5V8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDCP1Q9H5V8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.67■□□□□ 0.1
CDCP1Q9H5V8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.67■□□□□ 0.1
CDCP1Q9H5V8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDCP1Q9H5V8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.67■□□□□ 0.1
CDCP1Q9H5V8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 AL031432.2-201ENST00000566714 459 ntBASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 AL928711.1-201ENST00000570165 459 ntBASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 AC091812.2-201ENST00000619081 385 ntBASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.66■□□□□ 0.1
CDCP1Q9H5V8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 AC092919.2-201ENST00000623631 1645 ntBASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 OR6D1P-203ENST00000641209 4860 ntBASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 SNHG9-202ENST00000564014 471 ntBASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 AP002472.1-201ENST00000577490 586 ntBASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 MIR4515-201ENST00000584082 81 ntBASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 AL645728.2-201ENST00000641974 660 ntBASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDCP1Q9H5V8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
CDCP1Q9H5V8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.64■□□□□ 0.1
CDCP1Q9H5V8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CDCP1Q9H5V8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDCP1Q9H5V8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms