Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 AC079328.2-201ENST00000561241 3354 ntBASIC15.55■□□□□ 0.08
UBQLN3Q9H347 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBQLN3Q9H347 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.54■□□□□ 0.08
UBQLN3Q9H347 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN3Q9H347 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 AC087163.2-201ENST00000457299 853 ntBASIC15.53■□□□□ 0.08
UBQLN3Q9H347 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN3Q9H347 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms