Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 AL139288.1-201ENST00000623748 933 ntBASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 AC243591.1-201ENST00000452967 1364 ntBASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 NUS1P2-201ENST00000417358 873 ntBASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 RBM17P3-201ENST00000417687 1192 ntBASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 AC106795.1-205ENST00000512851 1056 ntBASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 AL022326.1-202ENST00000641533 845 ntBASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
POLR2J3Q9H1A7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms