Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 AC092053.1-201ENST00000605787 1936 ntBASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 AL023806.1-201ENST00000603994 1649 ntBASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 RN7SL752P-201ENST00000463779 287 ntBASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 AC132938.2-201ENST00000579188 680 ntBASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 AL591163.1-201ENST00000641757 987 ntBASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 KRT8P39-201ENST00000396270 1433 ntBASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 SPDYE19P-201ENST00000338590 713 ntBASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 AC022494.1-201ENST00000466044 728 ntBASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 AC044860.1-202ENST00000559481 777 ntBASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 WASH4P-201ENST00000564273 1246 ntBASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTFDC1Q9BY42 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 SPDYE17-201ENST00000412399 783 ntBASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 ACA64.2-201ENST00000459014 129 ntBASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 SPDYE18-201ENST00000510091 1050 ntBASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 AC008494.3-201ENST00000606615 944 ntBASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.12■□□□□ 0.81
RTFDC1Q9BY42 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RTFDC1Q9BY42 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms