Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 BCL2-203ENST00000589955 5011 ntBASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 TUBB8P12-201ENST00000308911 1335 ntBASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 TUBB7P-202ENST00000428444 1305 ntBASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 TUBB8P7-204ENST00000567960 1332 ntBASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 FAM86GP-201ENST00000448322 971 ntBASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 KRT8P48-201ENST00000515599 1220 ntBASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 KRT8P49-201ENST00000604166 1432 ntBASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPAP1Q9BWH6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPAP1Q9BWH6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPAP1Q9BWH6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 AC067863.1-201ENST00000494933 530 ntBASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 AC091167.2-201ENST00000579581 588 ntBASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.26■□□□□ 0.83
RPAP1Q9BWH6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 SPDYE11-202ENST00000450699 704 ntBASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 RARRES2P8-201ENST00000566335 367 ntBASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 SPDYE9P-201ENST00000570642 692 ntBASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 SPDYE10P-202ENST00000612005 668 ntBASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 SPDYE8P-202ENST00000612377 668 ntBASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPAP1Q9BWH6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms