Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ARID3AQ99856 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ARID3AQ99856 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.18■□□□□ 0.66
ARID3AQ99856 AP002383.4-201ENST00000442518 975 ntBASIC19.18■□□□□ 0.66
ARID3AQ99856 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 AC091607.1-201ENST00000490318 1060 ntBASIC19.18■□□□□ 0.66
ARID3AQ99856 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.18■□□□□ 0.66
ARID3AQ99856 AL121672.3-201ENST00000608644 468 ntBASIC19.18■□□□□ 0.66
ARID3AQ99856 AC124864.1-201ENST00000623408 392 ntBASIC19.18■□□□□ 0.66
ARID3AQ99856 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.18■□□□□ 0.66
ARID3AQ99856 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ARID3AQ99856 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.18■□□□□ 0.66
ARID3AQ99856 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ARID3AQ99856 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ARID3AQ99856 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 AC006449.5-201ENST00000610658 2098 ntBASIC19.18■□□□□ 0.66
ARID3AQ99856 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ARID3AQ99856 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ARID3AQ99856 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ARID3AQ99856 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.17■□□□□ 0.66
ARID3AQ99856 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.17■□□□□ 0.66
ARID3AQ99856 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.17■□□□□ 0.66
ARID3AQ99856 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ARID3AQ99856 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ARID3AQ99856 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ARID3AQ99856 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
ARID3AQ99856 CHCHD2P8-201ENST00000429873 447 ntBASIC19.17■□□□□ 0.66
ARID3AQ99856 TSSC2-201ENST00000450217 709 ntBASIC19.17■□□□□ 0.66
ARID3AQ99856 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.17■□□□□ 0.66
ARID3AQ99856 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ARID3AQ99856 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.17■□□□□ 0.66
ARID3AQ99856 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.17■□□□□ 0.66
ARID3AQ99856 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.17■□□□□ 0.66
ARID3AQ99856 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.17■□□□□ 0.66
ARID3AQ99856 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.17■□□□□ 0.66
ARID3AQ99856 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
ARID3AQ99856 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.17■□□□□ 0.66
ARID3AQ99856 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.17■□□□□ 0.66
ARID3AQ99856 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.17■□□□□ 0.66
ARID3AQ99856 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARID3AQ99856 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.16■□□□□ 0.66
ARID3AQ99856 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ARID3AQ99856 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC19.16■□□□□ 0.66
ARID3AQ99856 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.16■□□□□ 0.66
ARID3AQ99856 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 UPK3BP1-201ENST00000428678 509 ntBASIC19.16■□□□□ 0.66
ARID3AQ99856 GUSBP12-201ENST00000513727 720 ntBASIC19.16■□□□□ 0.66
ARID3AQ99856 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.16■□□□□ 0.66
ARID3AQ99856 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.16■□□□□ 0.66
ARID3AQ99856 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.16■□□□□ 0.66
ARID3AQ99856 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.16■□□□□ 0.66
ARID3AQ99856 IGHV3-41-201ENST00000613121 348 ntBASIC19.16■□□□□ 0.66
ARID3AQ99856 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.16■□□□□ 0.66
ARID3AQ99856 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.16■□□□□ 0.66
ARID3AQ99856 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
ARID3AQ99856 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ARID3AQ99856 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms