Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 AC055876.2-201ENST00000531834 546 ntBASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 AC044860.1-202ENST00000559481 777 ntBASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 AC120498.9-201ENST00000339021 3867 ntBASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 AC106872.11-201ENST00000605838 421 ntBASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 MIR8072-201ENST00000614241 80 ntBASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 AC128714.1-201ENST00000637035 887 ntBASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CSMD1Q96PZ7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
CSMD1Q96PZ7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 AC079328.1-201ENST00000560358 952 ntBASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 AC073439.1-201ENST00000624121 1774 ntBASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 AL133215.2-201ENST00000609242 977 ntBASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.08□□□□□ -0.16
CSMD1Q96PZ7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms