Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 PIN1P1-201ENST00000412108 996 ntBASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 MIR4453-201ENST00000584019 89 ntBASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SLC46A1Q96NT5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 LINC02012-201ENST00000608206 1725 ntBASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 SERBP1P5-201ENST00000510079 1181 ntBASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 AC009118.2-201ENST00000613275 655 ntBASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
SLC46A1Q96NT5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 RNU1-129P-201ENST00000384064 167 ntBASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 MIR3909-201ENST00000579518 119 ntBASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 U1.21-201ENST00000580816 167 ntBASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 SPDYE22P-201ENST00000582158 798 ntBASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC46A1Q96NT5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms