Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 HLA-H-201ENST00000383620 1096 ntBASIC19.44■□□□□ 0.7
CCDC17Q96LX7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 AC098859.1-201ENST00000502915 1238 ntBASIC19.44■□□□□ 0.7
CCDC17Q96LX7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 AL158211.3-201ENST00000607385 239 ntBASIC19.44■□□□□ 0.7
CCDC17Q96LX7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 FAM220BP-201ENST00000377689 816 ntBASIC19.43■□□□□ 0.7
CCDC17Q96LX7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 MIR4453-201ENST00000584019 89 ntBASIC19.43■□□□□ 0.7
CCDC17Q96LX7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC17Q96LX7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 PCDHB18P-201ENST00000524813 2368 ntBASIC19.42■□□□□ 0.7
CCDC17Q96LX7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 BASP1P1-201ENST00000430708 665 ntBASIC19.42■□□□□ 0.7
CCDC17Q96LX7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.42■□□□□ 0.7
CCDC17Q96LX7 HLA-J-202ENST00000469281 1241 ntBASIC19.42■□□□□ 0.7
CCDC17Q96LX7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 LINC02084-201ENST00000606069 1096 ntBASIC19.42■□□□□ 0.7
CCDC17Q96LX7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC17Q96LX7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms