Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.77■□□□□ 0.44
CALR3Q96L12 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.77■□□□□ 0.44
CALR3Q96L12 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALR3Q96L12 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALR3Q96L12 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALR3Q96L12 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALR3Q96L12 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CALR3Q96L12 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALR3Q96L12 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALR3Q96L12 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.77■□□□□ 0.43
CALR3Q96L12 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALR3Q96L12 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CALR3Q96L12 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.77■□□□□ 0.43
CALR3Q96L12 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALR3Q96L12 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALR3Q96L12 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CALR3Q96L12 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CALR3Q96L12 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CALR3Q96L12 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.76■□□□□ 0.43
CALR3Q96L12 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.76■□□□□ 0.43
CALR3Q96L12 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.76■□□□□ 0.43
CALR3Q96L12 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.76■□□□□ 0.43
CALR3Q96L12 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.76■□□□□ 0.43
CALR3Q96L12 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CALR3Q96L12 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 FER1L4-210ENST00000615531 5998 ntBASIC17.76■□□□□ 0.43
CALR3Q96L12 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CALR3Q96L12 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.76■□□□□ 0.43
CALR3Q96L12 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 MPDU1-223ENST00000582151 728 ntBASIC17.76■□□□□ 0.43
CALR3Q96L12 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.76■□□□□ 0.43
CALR3Q96L12 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.76■□□□□ 0.43
CALR3Q96L12 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CALR3Q96L12 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CALR3Q96L12 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.76■□□□□ 0.43
CALR3Q96L12 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CALR3Q96L12 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.76■□□□□ 0.43
CALR3Q96L12 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.76■□□□□ 0.43
CALR3Q96L12 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.76■□□□□ 0.43
CALR3Q96L12 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALR3Q96L12 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.76■□□□□ 0.43
CALR3Q96L12 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.75■□□□□ 0.43
CALR3Q96L12 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.75■□□□□ 0.43
CALR3Q96L12 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.75■□□□□ 0.43
CALR3Q96L12 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CALR3Q96L12 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.75■□□□□ 0.43
CALR3Q96L12 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
CALR3Q96L12 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CALR3Q96L12 POU5F1P6-201ENST00000466990 990 ntBASIC17.75■□□□□ 0.43
CALR3Q96L12 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.75■□□□□ 0.43
CALR3Q96L12 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.75■□□□□ 0.43
CALR3Q96L12 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.75■□□□□ 0.43
CALR3Q96L12 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CALR3Q96L12 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.75■□□□□ 0.43
CALR3Q96L12 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.75■□□□□ 0.43
CALR3Q96L12 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.75■□□□□ 0.43
CALR3Q96L12 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CALR3Q96L12 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.75■□□□□ 0.43
CALR3Q96L12 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CALR3Q96L12 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.75■□□□□ 0.43
CALR3Q96L12 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CALR3Q96L12 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.75■□□□□ 0.43
CALR3Q96L12 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CALR3Q96L12 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALR3Q96L12 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.74■□□□□ 0.43
CALR3Q96L12 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms