Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 AC111152.3-201ENST00000569699 673 ntBASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLPTM1LQ96KA5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.14■□□□□ 0.18
CLPTM1LQ96KA5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.14■□□□□ 0.18
CLPTM1LQ96KA5 AC006058.4-201ENST00000624016 1670 ntBASIC16.14■□□□□ 0.18
CLPTM1LQ96KA5 SNX18-202ENST00000343017 3140 ntBASIC16.14■□□□□ 0.18
CLPTM1LQ96KA5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLPTM1LQ96KA5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.14■□□□□ 0.18
CLPTM1LQ96KA5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 AC009336.1-201ENST00000608941 1553 ntBASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 AP000523.1-201ENST00000398242 1049 ntBASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 TSPY7P-201ENST00000431358 1114 ntBASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 Z99916.2-201ENST00000604037 246 ntBASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 AL009178.2-201ENST00000597278 2719 ntBASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLPTM1LQ96KA5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 GCSHP5-201ENST00000443090 522 ntBASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 AC098590.1-201ENST00000468126 897 ntBASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 GGT3P-204ENST00000453783 1664 ntBASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLPTM1LQ96KA5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms