Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIPA1Q96FS4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 LINC02012-201ENST00000608206 1725 ntBASIC16.76■□□□□ 0.27
SIPA1Q96FS4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.76■□□□□ 0.27
SIPA1Q96FS4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 AL512638.1-201ENST00000457493 794 ntBASIC16.76■□□□□ 0.27
SIPA1Q96FS4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 AC108860.2-201ENST00000562760 2183 ntBASIC16.76■□□□□ 0.27
SIPA1Q96FS4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIPA1Q96FS4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 CROCCP2-202ENST00000412962 2773 ntBASIC16.75■□□□□ 0.27
SIPA1Q96FS4 LINC00895-201ENST00000629028 1637 ntBASIC16.75■□□□□ 0.27
SIPA1Q96FS4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 TSPY16P-201ENST00000449843 468 ntBASIC16.75■□□□□ 0.27
SIPA1Q96FS4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 AC105233.2-201ENST00000523697 349 ntBASIC16.75■□□□□ 0.27
SIPA1Q96FS4 AF228730.5-201ENST00000530288 346 ntBASIC16.75■□□□□ 0.27
SIPA1Q96FS4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 MIR4453-201ENST00000584019 89 ntBASIC16.75■□□□□ 0.27
SIPA1Q96FS4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
SIPA1Q96FS4 AC018470.1-201ENST00000624790 3129 ntBASIC16.74■□□□□ 0.27
SIPA1Q96FS4 PCDHB18P-201ENST00000524813 2368 ntBASIC16.74■□□□□ 0.27
SIPA1Q96FS4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIPA1Q96FS4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms