Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
DDX1Q92499 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
DDX1Q92499 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
DDX1Q92499 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX1Q92499 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX1Q92499 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX1Q92499 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DDX1Q92499 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
DDX1Q92499 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
DDX1Q92499 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX1Q92499 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX1Q92499 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DDX1Q92499 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.82■□□□□ 0.44
DDX1Q92499 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 AL645939.2-201ENST00000427340 991 ntBASIC17.82■□□□□ 0.44
DDX1Q92499 AC108751.1-201ENST00000490852 363 ntBASIC17.82■□□□□ 0.44
DDX1Q92499 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.82■□□□□ 0.44
DDX1Q92499 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX1Q92499 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX1Q92499 AC087641.1-201ENST00000557561 1021 ntBASIC17.82■□□□□ 0.44
DDX1Q92499 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
DDX1Q92499 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
DDX1Q92499 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
DDX1Q92499 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX1Q92499 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
DDX1Q92499 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX1Q92499 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX1Q92499 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
DDX1Q92499 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX1Q92499 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX1Q92499 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX1Q92499 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX1Q92499 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
DDX1Q92499 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX1Q92499 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX1Q92499 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
DDX1Q92499 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX1Q92499 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX1Q92499 IGLL3P-201ENST00000412472 434 ntBASIC17.81■□□□□ 0.44
DDX1Q92499 HCG4-201ENST00000418983 998 ntBASIC17.81■□□□□ 0.44
DDX1Q92499 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX1Q92499 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX1Q92499 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
DDX1Q92499 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX1Q92499 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX1Q92499 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX1Q92499 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX1Q92499 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX1Q92499 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX1Q92499 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX1Q92499 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX1Q92499 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.81■□□□□ 0.44
DDX1Q92499 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
DDX1Q92499 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX1Q92499 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX1Q92499 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
DDX1Q92499 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
DDX1Q92499 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX1Q92499 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX1Q92499 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DDX1Q92499 AL035633.1-201ENST00000406139 838 ntBASIC17.8■□□□□ 0.44
DDX1Q92499 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.8■□□□□ 0.44
DDX1Q92499 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.8■□□□□ 0.44
DDX1Q92499 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
DDX1Q92499 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX1Q92499 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
DDX1Q92499 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 AL596442.2-201ENST00000610240 980 ntBASIC17.8■□□□□ 0.44
DDX1Q92499 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.8■□□□□ 0.44
DDX1Q92499 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DDX1Q92499 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX1Q92499 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX1Q92499 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.8■□□□□ 0.44
DDX1Q92499 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms