Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 AC092919.2-201ENST00000623631 1645 ntBASIC17.74■□□□□ 0.43
UBA3Q8TBC4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 AC099398.1-201ENST00000567919 2776 ntBASIC17.74■□□□□ 0.43
UBA3Q8TBC4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
UBA3Q8TBC4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 AC074386.1-202ENST00000463561 864 ntBASIC17.73■□□□□ 0.43
UBA3Q8TBC4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 PDPK2P-202ENST00000562415 1191 ntBASIC17.73■□□□□ 0.43
UBA3Q8TBC4 AC040169.1-201ENST00000565382 521 ntBASIC17.73■□□□□ 0.43
UBA3Q8TBC4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBA3Q8TBC4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 PCDHA14-201ENST00000506751 2298 ntBASIC17.72■□□□□ 0.43
UBA3Q8TBC4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.72■□□□□ 0.43
UBA3Q8TBC4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 AC084018.2-201ENST00000613093 2607 ntBASIC17.72■□□□□ 0.43
UBA3Q8TBC4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.72■□□□□ 0.43
UBA3Q8TBC4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 KRT8P39-201ENST00000396270 1433 ntBASIC17.72■□□□□ 0.43
UBA3Q8TBC4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.72■□□□□ 0.43
UBA3Q8TBC4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBA3Q8TBC4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms