Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC170Q8IYT3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC170Q8IYT3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 AL512652.2-201ENST00000625156 1716 ntBASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 FAM86EP-206ENST00000510506 987 ntBASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 AC092329.2-201ENST00000598402 547 ntBASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 AL590326.2-201ENST00000625139 305 ntBASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC170Q8IYT3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 AC006449.6-201ENST00000612330 2296 ntBASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 RCN1P1-201ENST00000400413 996 ntBASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 AP002414.4-201ENST00000589764 1148 ntBASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 AC116407.4-201ENST00000623319 1061 ntBASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 KRT8P39-201ENST00000396270 1433 ntBASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC170Q8IYT3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC170Q8IYT3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms