Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 TERC-201ENST00000602385 541 ntBASIC16.62■□□□□ 0.25
HPS6Q86YV9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.62■□□□□ 0.25
HPS6Q86YV9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 MST1L-201ENST00000442552 2185 ntBASIC16.62■□□□□ 0.25
HPS6Q86YV9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS6Q86YV9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HPS6Q86YV9 AC092850.2-201ENST00000623821 2697 ntBASIC16.62■□□□□ 0.25
HPS6Q86YV9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 RCN1P2-201ENST00000398357 915 ntBASIC16.61■□□□□ 0.25
HPS6Q86YV9 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 AC068472.1-201ENST00000474589 881 ntBASIC16.61■□□□□ 0.25
HPS6Q86YV9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 MTDHP3-201ENST00000594186 672 ntBASIC16.61■□□□□ 0.25
HPS6Q86YV9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
HPS6Q86YV9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS6Q86YV9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS6Q86YV9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS6Q86YV9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS6Q86YV9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS6Q86YV9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HPS6Q86YV9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS6Q86YV9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 RPL13AP23-201ENST00000480739 586 ntBASIC16.6■□□□□ 0.25
HPS6Q86YV9 SLC25A1P1-201ENST00000528351 927 ntBASIC16.6■□□□□ 0.25
HPS6Q86YV9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPS6Q86YV9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 AC011467.2-201ENST00000598425 242 ntBASIC16.6■□□□□ 0.25
HPS6Q86YV9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.6■□□□□ 0.25
HPS6Q86YV9 FAM215A-202ENST00000632077 792 ntBASIC16.6■□□□□ 0.25
HPS6Q86YV9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms