Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 KRT18P13-201ENST00000400056 1290 ntBASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 AC087641.1-201ENST00000557561 1021 ntBASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 AC013467.2-201ENST00000605472 835 ntBASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 AL603756.1-201ENST00000606511 2163 ntBASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LYSMD3Q7Z3D4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 AL596257.1-201ENST00000641463 2694 ntBASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 HCG4-201ENST00000418983 998 ntBASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 PGAM5P1-201ENST00000518923 814 ntBASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 KRT19P2-202ENST00000557173 1012 ntBASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 CYP2A7P1-201ENST00000595391 815 ntBASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 AC023141.13-201ENST00000604991 943 ntBASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 AL513190.1-201ENST00000621254 727 ntBASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 AC025580.3-201ENST00000617932 1424 ntBASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 AC012569.1-201ENST00000591191 1524 ntBASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 OR6D1P-203ENST00000641209 4860 ntBASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 AGGF1P2-201ENST00000426656 2106 ntBASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.84■□□□□ 0.29
LYSMD3Q7Z3D4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
LYSMD3Q7Z3D4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
LYSMD3Q7Z3D4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LYSMD3Q7Z3D4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.83■□□□□ 0.29
LYSMD3Q7Z3D4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LYSMD3Q7Z3D4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
LYSMD3Q7Z3D4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 AC023274.1-201ENST00000418278 595 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms