Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTF1AQ7RTS3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTF1AQ7RTS3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.19■□□□□ 0.98
PTF1AQ7RTS3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTF1AQ7RTS3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 ABALON-201ENST00000629058 1903 ntBASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 ELK2AP-201ENST00000392510 1007 ntBASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTF1AQ7RTS3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 KRT43P-201ENST00000434019 910 ntBASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 HNRNPA1P13-201ENST00000510646 963 ntBASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 RNA5SP412-201ENST00000516234 123 ntBASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 RRP7BP-205ENST00000566851 833 ntBASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTF1AQ7RTS3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 AC116353.5-201ENST00000638148 1699 ntBASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 AC093724.1-201ENST00000448659 1027 ntBASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 RNA5SP423-201ENST00000517127 109 ntBASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 C2orf69P2-201ENST00000562032 1123 ntBASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 RARRES2P5-201ENST00000564013 466 ntBASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 MIR5189-201ENST00000577370 114 ntBASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 AC025048.3-201ENST00000590609 569 ntBASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 AC020765.3-201ENST00000613051 740 ntBASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 AC005702.4-201ENST00000618393 416 ntBASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC21.16■□□□□ 0.98
PTF1AQ7RTS3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTF1AQ7RTS3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms