Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFWD3Q6PCD5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 AC074386.1-202ENST00000463561 864 ntBASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 PCDHA1-201ENST00000378133 2726 ntBASIC17.49■□□□□ 0.39
RFWD3Q6PCD5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 AC092919.2-201ENST00000623631 1645 ntBASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.48■□□□□ 0.39
RFWD3Q6PCD5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms