Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 MIR661-201ENST00000384842 89 ntBASIC15.03■□□□□ -0
RNFT1Q5M7Z0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 AC097493.3-201ENST00000509725 367 ntBASIC15.03■□□□□ -0
RNFT1Q5M7Z0 AC105233.2-201ENST00000523697 349 ntBASIC15.03■□□□□ -0
RNFT1Q5M7Z0 AF228730.5-201ENST00000530288 346 ntBASIC15.03■□□□□ -0
RNFT1Q5M7Z0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 AC138761.1-201ENST00000584393 385 ntBASIC15.03■□□□□ -0
RNFT1Q5M7Z0 AC073389.1-201ENST00000595595 795 ntBASIC15.03■□□□□ -0
RNFT1Q5M7Z0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 AC013467.2-201ENST00000605472 835 ntBASIC15.03■□□□□ -0
RNFT1Q5M7Z0 AL390754.1-201ENST00000619088 582 ntBASIC15.03■□□□□ -0
RNFT1Q5M7Z0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNFT1Q5M7Z0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 AP3S2-216ENST00000617003 1561 ntBASIC15.02■□□□□ -0
RNFT1Q5M7Z0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 AC092580.3-201ENST00000430932 139 ntBASIC15.02■□□□□ -0
RNFT1Q5M7Z0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.02■□□□□ -0
RNFT1Q5M7Z0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RNFT1Q5M7Z0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RNFT1Q5M7Z0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNFT1Q5M7Z0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RNFT1Q5M7Z0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNFT1Q5M7Z0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.02□□□□□ -0.01
RNFT1Q5M7Z0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RNFT1Q5M7Z0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RNFT1Q5M7Z0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.02□□□□□ -0.01
RNFT1Q5M7Z0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RNFT1Q5M7Z0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
RNFT1Q5M7Z0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 AC106820.2-201ENST00000563775 3264 ntBASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms