Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 AL671710.1-201ENST00000610245 2349 ntBASIC14.66□□□□□ -0.06
HIST1H3AP68431 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 AC092910.1-201ENST00000482027 1129 ntBASIC14.65□□□□□ -0.06
HIST1H3AP68431 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 SLC25A6P4-201ENST00000586535 553 ntBASIC14.65□□□□□ -0.06
HIST1H3AP68431 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 ACTL9-202ENST00000612068 1252 ntBASIC14.65□□□□□ -0.06
HIST1H3AP68431 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HIST1H3AP68431 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H3AP68431 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.07
HIST1H3AP68431 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H3AP68431 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H3AP68431 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H3AP68431 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 AC006449.5-201ENST00000610658 2098 ntBASIC14.64□□□□□ -0.07
HIST1H3AP68431 GGT4P-201ENST00000623672 1708 ntBASIC14.64□□□□□ -0.07
HIST1H3AP68431 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H3AP68431 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H3AP68431 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H3AP68431 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H3AP68431 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H3AP68431 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST1H3AP68431 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.64□□□□□ -0.07
HIST1H3AP68431 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 AC098831.1-202ENST00000438821 336 ntBASIC14.64□□□□□ -0.07
HIST1H3AP68431 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 AL662844.1-201ENST00000546340 181 ntBASIC14.64□□□□□ -0.07
HIST1H3AP68431 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.64□□□□□ -0.07
HIST1H3AP68431 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms