Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
SKP1P63208 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.92■□□□□ 0.14
SKP1P63208 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
SKP1P63208 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.92■□□□□ 0.14
SKP1P63208 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.92■□□□□ 0.14
SKP1P63208 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 PMS2P4-201ENST00000412466 1052 ntBASIC15.92■□□□□ 0.14
SKP1P63208 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.92■□□□□ 0.14
SKP1P63208 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.92■□□□□ 0.14
SKP1P63208 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.92■□□□□ 0.14
SKP1P63208 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.92■□□□□ 0.14
SKP1P63208 KRT18P2-201ENST00000447938 1258 ntBASIC15.92■□□□□ 0.14
SKP1P63208 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SKP1P63208 AC112191.1-201ENST00000523689 701 ntBASIC15.92■□□□□ 0.14
SKP1P63208 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SKP1P63208 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.92■□□□□ 0.14
SKP1P63208 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.92■□□□□ 0.14
SKP1P63208 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.92■□□□□ 0.14
SKP1P63208 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.92■□□□□ 0.14
SKP1P63208 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.92■□□□□ 0.14
SKP1P63208 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.92■□□□□ 0.14
SKP1P63208 CYP2A7P1-201ENST00000595391 815 ntBASIC15.92■□□□□ 0.14
SKP1P63208 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.92■□□□□ 0.14
SKP1P63208 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.92■□□□□ 0.14
SKP1P63208 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SKP1P63208 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.92■□□□□ 0.14
SKP1P63208 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.92■□□□□ 0.14
SKP1P63208 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SKP1P63208 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.92■□□□□ 0.14
SKP1P63208 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SKP1P63208 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SKP1P63208 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
SKP1P63208 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SKP1P63208 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 AL391256.1-201ENST00000443260 1855 ntBASIC15.91■□□□□ 0.14
SKP1P63208 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.91■□□□□ 0.14
SKP1P63208 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.91■□□□□ 0.14
SKP1P63208 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.91■□□□□ 0.14
SKP1P63208 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.91■□□□□ 0.14
SKP1P63208 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SKP1P63208 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 AC002056.1-201ENST00000395613 760 ntBASIC15.91■□□□□ 0.14
SKP1P63208 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SKP1P63208 BX842568.4-201ENST00000421222 227 ntBASIC15.91■□□□□ 0.14
SKP1P63208 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.91■□□□□ 0.14
SKP1P63208 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.91■□□□□ 0.14
SKP1P63208 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.91■□□□□ 0.14
SKP1P63208 PGAM5P1-201ENST00000518923 814 ntBASIC15.91■□□□□ 0.14
SKP1P63208 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.91■□□□□ 0.14
SKP1P63208 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.91■□□□□ 0.14
SKP1P63208 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.91■□□□□ 0.14
SKP1P63208 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.91■□□□□ 0.14
SKP1P63208 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.91■□□□□ 0.14
SKP1P63208 MIR3687-2-201ENST00000577708 61 ntBASIC15.91■□□□□ 0.14
SKP1P63208 MIR4492-201ENST00000581627 80 ntBASIC15.91■□□□□ 0.14
SKP1P63208 AC021097.1-201ENST00000607902 574 ntBASIC15.91■□□□□ 0.14
SKP1P63208 MIR3687-1-201ENST00000614492 61 ntBASIC15.91■□□□□ 0.14
SKP1P63208 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.91■□□□□ 0.14
SKP1P63208 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
SKP1P63208 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SKP1P63208 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.91■□□□□ 0.14
SKP1P63208 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SKP1P63208 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.91■□□□□ 0.14
SKP1P63208 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SKP1P63208 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SKP1P63208 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SKP1P63208 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SKP1P63208 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.9■□□□□ 0.14
SKP1P63208 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.9■□□□□ 0.14
SKP1P63208 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SKP1P63208 SLC22A20-204ENST00000530038 1673 ntBASIC15.9■□□□□ 0.14
SKP1P63208 PCDHB17P-201ENST00000539533 2393 ntBASIC15.9■□□□□ 0.14
SKP1P63208 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.9■□□□□ 0.14
SKP1P63208 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SKP1P63208 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms