Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SNRPEP62304 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SNRPEP62304 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SNRPEP62304 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SNRPEP62304 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 KRT18P68-201ENST00000392293 1000 ntBASIC12.83□□□□□ -0.36
SNRPEP62304 TUBB8P6-201ENST00000436895 1288 ntBASIC12.83□□□□□ -0.36
SNRPEP62304 KRT18P16-201ENST00000510337 1294 ntBASIC12.83□□□□□ -0.36
SNRPEP62304 TPRG1LP1-201ENST00000598702 760 ntBASIC12.83□□□□□ -0.36
SNRPEP62304 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.83□□□□□ -0.36
SNRPEP62304 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.83□□□□□ -0.36
SNRPEP62304 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 AC091951.1-201ENST00000512854 2465 ntBASIC12.83□□□□□ -0.36
SNRPEP62304 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.83□□□□□ -0.36
SNRPEP62304 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.83□□□□□ -0.36
SNRPEP62304 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNRPEP62304 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.83□□□□□ -0.36
SNRPEP62304 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SNRPEP62304 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 AL645728.1-201ENST00000366221 2101 ntBASIC12.82□□□□□ -0.36
SNRPEP62304 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.82□□□□□ -0.36
SNRPEP62304 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SNRPEP62304 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
SNRPEP62304 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC12.82□□□□□ -0.36
SNRPEP62304 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SNRPEP62304 C2orf69P4-201ENST00000565394 541 ntBASIC12.82□□□□□ -0.36
SNRPEP62304 AL160286.2-201ENST00000567150 934 ntBASIC12.82□□□□□ -0.36
SNRPEP62304 AL591742.1-201ENST00000604433 565 ntBASIC12.82□□□□□ -0.36
SNRPEP62304 AC104187.1-201ENST00000607510 612 ntBASIC12.82□□□□□ -0.36
SNRPEP62304 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC12.82□□□□□ -0.36
SNRPEP62304 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SNRPEP62304 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.82□□□□□ -0.36
SNRPEP62304 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
SNRPEP62304 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 CDC14C-201ENST00000428251 1719 ntBASIC12.82□□□□□ -0.36
SNRPEP62304 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNRPEP62304 LINC02447-202ENST00000501888 2146 ntBASIC12.82□□□□□ -0.36
SNRPEP62304 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.82□□□□□ -0.36
SNRPEP62304 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNRPEP62304 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNRPEP62304 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNRPEP62304 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
SNRPEP62304 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNRPEP62304 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SNRPEP62304 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNRPEP62304 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.81□□□□□ -0.36
SNRPEP62304 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SNRPEP62304 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNRPEP62304 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNRPEP62304 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNRPEP62304 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNRPEP62304 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNRPEP62304 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms