Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
CDKN2DP55273 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CDKN2DP55273 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKN2DP55273 AC129492.6-201ENST00000611383 1305 ntBASIC16.56■□□□□ 0.24
CDKN2DP55273 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CDKN2DP55273 AL450487.1-201ENST00000426799 995 ntBASIC16.56■□□□□ 0.24
CDKN2DP55273 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.56■□□□□ 0.24
CDKN2DP55273 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKN2DP55273 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 AC108073.2-201ENST00000464002 357 ntBASIC16.56■□□□□ 0.24
CDKN2DP55273 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.56■□□□□ 0.24
CDKN2DP55273 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.56■□□□□ 0.24
CDKN2DP55273 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKN2DP55273 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKN2DP55273 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.56■□□□□ 0.24
CDKN2DP55273 AC104692.2-201ENST00000603054 253 ntBASIC16.56■□□□□ 0.24
CDKN2DP55273 AC117500.6-201ENST00000624871 588 ntBASIC16.56■□□□□ 0.24
CDKN2DP55273 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.56■□□□□ 0.24
CDKN2DP55273 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.56■□□□□ 0.24
CDKN2DP55273 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CDKN2DP55273 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.56■□□□□ 0.24
CDKN2DP55273 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDKN2DP55273 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKN2DP55273 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.55■□□□□ 0.24
CDKN2DP55273 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKN2DP55273 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKN2DP55273 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKN2DP55273 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKN2DP55273 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKN2DP55273 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDKN2DP55273 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CDKN2DP55273 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKN2DP55273 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKN2DP55273 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CDKN2DP55273 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKN2DP55273 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDKN2DP55273 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDKN2DP55273 AC004790.2-201ENST00000623588 572 ntBASIC16.55■□□□□ 0.24
CDKN2DP55273 AC005593.1-201ENST00000624894 515 ntBASIC16.55■□□□□ 0.24
CDKN2DP55273 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKN2DP55273 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKN2DP55273 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKN2DP55273 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDKN2DP55273 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKN2DP55273 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKN2DP55273 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKN2DP55273 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.54■□□□□ 0.24
CDKN2DP55273 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.54■□□□□ 0.24
CDKN2DP55273 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDKN2DP55273 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 AC008741.2-201ENST00000612792 3115 ntBASIC16.54■□□□□ 0.24
CDKN2DP55273 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKN2DP55273 RPS2P28-201ENST00000314255 741 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms