Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MSH6P52701 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
MSH6P52701 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.91■■□□□ 1.26
MSH6P52701 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 SPDYE17-201ENST00000412399 783 ntBASIC22.91■■□□□ 1.26
MSH6P52701 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC22.91■■□□□ 1.26
MSH6P52701 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
MSH6P52701 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC22.91■■□□□ 1.26
MSH6P52701 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC22.91■■□□□ 1.26
MSH6P52701 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC22.91■■□□□ 1.26
MSH6P52701 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
MSH6P52701 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
MSH6P52701 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC22.91■■□□□ 1.26
MSH6P52701 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.91■■□□□ 1.26
MSH6P52701 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.91■■□□□ 1.26
MSH6P52701 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC22.91■■□□□ 1.26
MSH6P52701 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MSH6P52701 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.91■■□□□ 1.26
MSH6P52701 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 LBX2-201ENST00000341396 886 ntTSL 3 BASIC22.9■■□□□ 1.26
MSH6P52701 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC22.9■■□□□ 1.26
MSH6P52701 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC22.9■■□□□ 1.26
MSH6P52701 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
MSH6P52701 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC22.9■■□□□ 1.26
MSH6P52701 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC22.9■■□□□ 1.26
MSH6P52701 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC22.9■■□□□ 1.26
MSH6P52701 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC22.9■■□□□ 1.26
MSH6P52701 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
MSH6P52701 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
MSH6P52701 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 CLK3P2-201ENST00000427566 1453 ntBASIC22.9■■□□□ 1.26
MSH6P52701 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 CDC14C-201ENST00000428251 1719 ntBASIC22.9■■□□□ 1.26
MSH6P52701 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC22.9■■□□□ 1.26
MSH6P52701 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.9■■□□□ 1.26
MSH6P52701 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
MSH6P52701 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC22.9■■□□□ 1.26
MSH6P52701 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH6P52701 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.9■■□□□ 1.26
MSH6P52701 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.9■■□□□ 1.26
MSH6P52701 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.9■■□□□ 1.26
MSH6P52701 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.9■■□□□ 1.26
MSH6P52701 ABALON-201ENST00000629058 1903 ntBASIC22.9■■□□□ 1.26
MSH6P52701 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC22.9■■□□□ 1.26
MSH6P52701 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
MSH6P52701 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
MSH6P52701 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
MSH6P52701 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC22.89■■□□□ 1.26
MSH6P52701 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
MSH6P52701 PAM16-204ENST00000571941 674 ntTSL 3 BASIC22.89■■□□□ 1.26
MSH6P52701 FHL2-212ENST00000607522 759 ntTSL 2 BASIC22.89■■□□□ 1.26
MSH6P52701 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC22.89■■□□□ 1.26
MSH6P52701 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
MSH6P52701 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
MSH6P52701 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.89■■□□□ 1.26
MSH6P52701 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
MSH6P52701 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
MSH6P52701 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.89■■□□□ 1.26
MSH6P52701 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.26
MSH6P52701 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
MSH6P52701 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
MSH6P52701 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
MSH6P52701 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
MSH6P52701 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MSH6P52701 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MSH6P52701 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
MSH6P52701 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC22.89■■□□□ 1.25
MSH6P52701 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC22.89■■□□□ 1.25
MSH6P52701 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
MSH6P52701 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
MSH6P52701 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MSH6P52701 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
MSH6P52701 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
MSH6P52701 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
MSH6P52701 RHOA-206ENST00000454011 889 ntTSL 2 BASIC22.89■■□□□ 1.25
MSH6P52701 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
MSH6P52701 APRT-204ENST00000563655 709 ntTSL 5 BASIC22.89■■□□□ 1.25
MSH6P52701 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC22.89■■□□□ 1.25
MSH6P52701 SIGLEC29P-201ENST00000599873 1114 ntBASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms