Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 AL353732.1-201ENST00000569618 1459 ntBASIC17.68■□□□□ 0.42
TUBP50607 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.68■□□□□ 0.42
TUBP50607 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.68■□□□□ 0.42
TUBP50607 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBP50607 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TUBP50607 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBP50607 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBP50607 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBP50607 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TUBP50607 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
TUBP50607 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TUBP50607 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBP50607 AC254562.1-201ENST00000417586 456 ntBASIC17.67■□□□□ 0.42
TUBP50607 AC140658.5-201ENST00000438532 169 ntBASIC17.67■□□□□ 0.42
TUBP50607 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBP50607 AC112191.1-201ENST00000523689 701 ntBASIC17.67■□□□□ 0.42
TUBP50607 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBP50607 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TUBP50607 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.67■□□□□ 0.42
TUBP50607 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 FRMD8P1-201ENST00000440433 1524 ntBASIC17.67■□□□□ 0.42
TUBP50607 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TUBP50607 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TUBP50607 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBP50607 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBP50607 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TUBP50607 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 AC092053.1-201ENST00000605787 1936 ntBASIC17.66■□□□□ 0.42
TUBP50607 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 AP001094.4-201ENST00000579008 2176 ntBASIC17.66■□□□□ 0.42
TUBP50607 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBP50607 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBP50607 HCG4-201ENST00000418983 998 ntBASIC17.66■□□□□ 0.42
TUBP50607 DNAJB3-202ENST00000449667 1266 ntBASIC17.66■□□□□ 0.42
TUBP50607 AC124947.2-201ENST00000547118 1133 ntBASIC17.66■□□□□ 0.42
TUBP50607 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.66■□□□□ 0.42
TUBP50607 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.66■□□□□ 0.42
TUBP50607 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.66■□□□□ 0.42
TUBP50607 AC092902.6-201ENST00000641783 218 ntBASIC17.66■□□□□ 0.42
TUBP50607 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TUBP50607 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBP50607 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TUBP50607 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TUBP50607 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TUBP50607 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBP50607 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.66■□□□□ 0.42
TUBP50607 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBP50607 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TUBP50607 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBP50607 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TUBP50607 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TUBP50607 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TUBP50607 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBP50607 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBP50607 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBP50607 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms