Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CSNK1DP48730 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.75■□□□□ 0.27
CSNK1DP48730 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1DP48730 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1DP48730 AC079140.1-201ENST00000508039 487 ntBASIC16.75■□□□□ 0.27
CSNK1DP48730 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1DP48730 KRT8P23-201ENST00000560090 1207 ntBASIC16.75■□□□□ 0.27
CSNK1DP48730 LINC01225-203ENST00000563550 1244 ntBASIC16.75■□□□□ 0.27
CSNK1DP48730 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1DP48730 AC022145.2-201ENST00000598203 171 ntBASIC16.75■□□□□ 0.27
CSNK1DP48730 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.75■□□□□ 0.27
CSNK1DP48730 AL691403.2-201ENST00000618460 490 ntBASIC16.75■□□□□ 0.27
CSNK1DP48730 AC008267.7-201ENST00000624570 1194 ntBASIC16.75■□□□□ 0.27
CSNK1DP48730 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1DP48730 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1DP48730 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1DP48730 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CSNK1DP48730 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CSNK1DP48730 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1DP48730 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1DP48730 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1DP48730 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1DP48730 GGT3P-204ENST00000453783 1664 ntBASIC16.75■□□□□ 0.27
CSNK1DP48730 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1DP48730 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1DP48730 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1DP48730 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1DP48730 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1DP48730 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CSNK1DP48730 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.74■□□□□ 0.27
CSNK1DP48730 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CSNK1DP48730 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CSNK1DP48730 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CSNK1DP48730 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.74■□□□□ 0.27
CSNK1DP48730 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.74■□□□□ 0.27
CSNK1DP48730 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1DP48730 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CSNK1DP48730 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CSNK1DP48730 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.74■□□□□ 0.27
CSNK1DP48730 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.74■□□□□ 0.27
CSNK1DP48730 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.74■□□□□ 0.27
CSNK1DP48730 AC084121.4-201ENST00000641598 221 ntBASIC16.74■□□□□ 0.27
CSNK1DP48730 AF228730.8-201ENST00000642140 221 ntBASIC16.74■□□□□ 0.27
CSNK1DP48730 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CSNK1DP48730 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.74■□□□□ 0.27
CSNK1DP48730 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CSNK1DP48730 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1DP48730 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
CSNK1DP48730 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CSNK1DP48730 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1DP48730 AGGF1P2-201ENST00000426656 2106 ntBASIC16.73■□□□□ 0.27
CSNK1DP48730 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1DP48730 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.73■□□□□ 0.27
CSNK1DP48730 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CSNK1DP48730 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1DP48730 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CSNK1DP48730 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1DP48730 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1DP48730 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1DP48730 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1DP48730 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1DP48730 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.73■□□□□ 0.27
CSNK1DP48730 AC004461.1-201ENST00000412461 403 ntBASIC16.73■□□□□ 0.27
CSNK1DP48730 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.73■□□□□ 0.27
CSNK1DP48730 DNAJB3-202ENST00000449667 1266 ntBASIC16.73■□□□□ 0.27
CSNK1DP48730 TIMM8BP1-201ENST00000452384 211 ntBASIC16.73■□□□□ 0.27
CSNK1DP48730 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.73■□□□□ 0.27
CSNK1DP48730 AC073389.1-201ENST00000595595 795 ntBASIC16.73■□□□□ 0.27
CSNK1DP48730 AP001160.2-201ENST00000596071 487 ntBASIC16.73■□□□□ 0.27
CSNK1DP48730 AC004835.2-201ENST00000603762 682 ntBASIC16.73■□□□□ 0.27
CSNK1DP48730 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.73■□□□□ 0.27
CSNK1DP48730 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CSNK1DP48730 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1DP48730 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1DP48730 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.73■□□□□ 0.27
CSNK1DP48730 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CSNK1DP48730 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1DP48730 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1DP48730 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CSNK1DP48730 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.73■□□□□ 0.27
CSNK1DP48730 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms