Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 AC011467.2-201ENST00000598425 242 ntBASIC14.82□□□□□ -0.04
SOX2P48431 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.82□□□□□ -0.04
SOX2P48431 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SOX2P48431 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
SOX2P48431 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SOX2P48431 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
SOX2P48431 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SOX2P48431 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SOX2P48431 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.82□□□□□ -0.04
SOX2P48431 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SOX2P48431 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SOX2P48431 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.81□□□□□ -0.04
SOX2P48431 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.81□□□□□ -0.04
SOX2P48431 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.81□□□□□ -0.04
SOX2P48431 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.81□□□□□ -0.04
SOX2P48431 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SOX2P48431 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.81□□□□□ -0.04
SOX2P48431 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.81□□□□□ -0.04
SOX2P48431 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.81□□□□□ -0.04
SOX2P48431 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 AC246785.2-201ENST00000432512 513 ntBASIC14.81□□□□□ -0.04
SOX2P48431 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.81□□□□□ -0.04
SOX2P48431 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SOX2P48431 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.81□□□□□ -0.04
SOX2P48431 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.81□□□□□ -0.04
SOX2P48431 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SOX2P48431 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.81□□□□□ -0.04
SOX2P48431 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.81□□□□□ -0.04
SOX2P48431 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.81□□□□□ -0.04
SOX2P48431 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SOX2P48431 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SOX2P48431 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 TP73-AS1-210ENST00000637775 1455 ntBASIC14.81□□□□□ -0.04
SOX2P48431 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.81□□□□□ -0.04
SOX2P48431 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SOX2P48431 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
SOX2P48431 AC148477.5-201ENST00000625164 1645 ntBASIC14.81□□□□□ -0.04
SOX2P48431 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SOX2P48431 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SOX2P48431 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.81□□□□□ -0.04
SOX2P48431 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.8□□□□□ -0.04
SOX2P48431 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.8□□□□□ -0.04
SOX2P48431 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.8□□□□□ -0.04
SOX2P48431 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.8□□□□□ -0.04
SOX2P48431 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SOX2P48431 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.8□□□□□ -0.04
SOX2P48431 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 AC105917.1-201ENST00000506637 2539 ntBASIC14.8□□□□□ -0.04
SOX2P48431 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SOX2P48431 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms