Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HMGCLP35914 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGCLP35914 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.66■□□□□ 0.26
HMGCLP35914 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCLP35914 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HMGCLP35914 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
HMGCLP35914 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.66■□□□□ 0.26
HMGCLP35914 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 MCCD1P2-201ENST00000423228 335 ntBASIC16.66■□□□□ 0.26
HMGCLP35914 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.66■□□□□ 0.26
HMGCLP35914 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.66■□□□□ 0.26
HMGCLP35914 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGCLP35914 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCLP35914 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCLP35914 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HMGCLP35914 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 PCDHA14-201ENST00000506751 2298 ntBASIC16.66■□□□□ 0.26
HMGCLP35914 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCLP35914 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HMGCLP35914 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGCLP35914 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HMGCLP35914 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
HMGCLP35914 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HMGCLP35914 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HMGCLP35914 GGT4P-201ENST00000623672 1708 ntBASIC16.65■□□□□ 0.26
HMGCLP35914 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HMGCLP35914 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGCLP35914 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HMGCLP35914 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HMGCLP35914 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGCLP35914 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 AC092474.2-201ENST00000424288 719 ntBASIC16.65■□□□□ 0.26
HMGCLP35914 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGCLP35914 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGCLP35914 AP002472.1-201ENST00000577490 586 ntBASIC16.65■□□□□ 0.26
HMGCLP35914 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGCLP35914 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGCLP35914 AC092919.2-201ENST00000623631 1645 ntBASIC16.65■□□□□ 0.26
HMGCLP35914 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HMGCLP35914 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGCLP35914 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HMGCLP35914 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGCLP35914 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGCLP35914 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HMGCLP35914 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCLP35914 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HMGCLP35914 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
HMGCLP35914 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
HMGCLP35914 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGCLP35914 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HMGCLP35914 GPAA1P2-202ENST00000606848 1787 ntBASIC16.64■□□□□ 0.25
HMGCLP35914 PKD1P1-201ENST00000458669 6805 ntBASIC16.64■□□□□ 0.25
HMGCLP35914 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGCLP35914 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HMGCLP35914 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGCLP35914 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCLP35914 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms