Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.39□□□□□ -0.43
CKS2P33552 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CKS2P33552 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.39□□□□□ -0.43
CKS2P33552 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CKS2P33552 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS2P33552 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CKS2P33552 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CKS2P33552 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS2P33552 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS2P33552 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.38□□□□□ -0.43
CKS2P33552 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
CKS2P33552 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.38□□□□□ -0.43
CKS2P33552 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS2P33552 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.38□□□□□ -0.43
CKS2P33552 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.38□□□□□ -0.43
CKS2P33552 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
CKS2P33552 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.38□□□□□ -0.43
CKS2P33552 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CKS2P33552 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
CKS2P33552 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CKS2P33552 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS2P33552 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
CKS2P33552 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CKS2P33552 AL596087.1-201ENST00000400979 1969 ntBASIC12.38□□□□□ -0.43
CKS2P33552 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CKS2P33552 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CKS2P33552 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS2P33552 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CKS2P33552 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CKS2P33552 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CKS2P33552 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.37□□□□□ -0.43
CKS2P33552 AC067750.1-201ENST00000608826 6545 ntBASIC12.37□□□□□ -0.43
CKS2P33552 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.37□□□□□ -0.43
CKS2P33552 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS2P33552 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms