Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC024267.1-201ENST00000582320 895 ntBASIC20.57■□□□□ 0.88
TM4SF1P30408 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.57■□□□□ 0.88
TM4SF1P30408 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.57■□□□□ 0.88
TM4SF1P30408 AL109936.8-201ENST00000641772 604 ntBASIC20.57■□□□□ 0.88
TM4SF1P30408 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF1P30408 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TM4SF1P30408 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF1P30408 REXO1L6P-201ENST00000603433 1515 ntBASIC20.57■□□□□ 0.88
TM4SF1P30408 AL589702.1-201ENST00000641229 1509 ntBASIC20.57■□□□□ 0.88
TM4SF1P30408 NEFHP1-201ENST00000412845 2629 ntBASIC20.57■□□□□ 0.88
TM4SF1P30408 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TM4SF1P30408 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TM4SF1P30408 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.56■□□□□ 0.88
TM4SF1P30408 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.56■□□□□ 0.88
TM4SF1P30408 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
TM4SF1P30408 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.56■□□□□ 0.88
TM4SF1P30408 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.56■□□□□ 0.88
TM4SF1P30408 AC245100.3-201ENST00000441281 285 ntBASIC20.56■□□□□ 0.88
TM4SF1P30408 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TM4SF1P30408 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.56■□□□□ 0.88
TM4SF1P30408 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.56■□□□□ 0.88
TM4SF1P30408 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
TM4SF1P30408 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.56■□□□□ 0.88
TM4SF1P30408 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.56■□□□□ 0.88
TM4SF1P30408 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.56■□□□□ 0.88
TM4SF1P30408 WFDC1-204ENST00000613603 549 ntBASIC20.56■□□□□ 0.88
TM4SF1P30408 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.56■□□□□ 0.88
TM4SF1P30408 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TM4SF1P30408 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.56■□□□□ 0.88
TM4SF1P30408 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TM4SF1P30408 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.56■□□□□ 0.88
TM4SF1P30408 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF1P30408 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.56■□□□□ 0.88
TM4SF1P30408 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.55■□□□□ 0.88
TM4SF1P30408 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.55■□□□□ 0.88
TM4SF1P30408 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.55■□□□□ 0.88
TM4SF1P30408 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.55■□□□□ 0.88
TM4SF1P30408 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.55■□□□□ 0.88
TM4SF1P30408 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.55■□□□□ 0.88
TM4SF1P30408 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TM4SF1P30408 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.55■□□□□ 0.88
TM4SF1P30408 AC092552.1-201ENST00000547243 906 ntBASIC20.55■□□□□ 0.88
TM4SF1P30408 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.55■□□□□ 0.88
TM4SF1P30408 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.55■□□□□ 0.88
TM4SF1P30408 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.55■□□□□ 0.88
TM4SF1P30408 TMEM261P1-201ENST00000604899 340 ntBASIC20.55■□□□□ 0.88
TM4SF1P30408 AC093726.1-201ENST00000608064 963 ntBASIC20.55■□□□□ 0.88
TM4SF1P30408 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TM4SF1P30408 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF1P30408 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.54■□□□□ 0.88
TM4SF1P30408 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF1P30408 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.54■□□□□ 0.88
TM4SF1P30408 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF1P30408 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF1P30408 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.54■□□□□ 0.88
TM4SF1P30408 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF1P30408 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TM4SF1P30408 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF1P30408 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.54■□□□□ 0.88
TM4SF1P30408 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF1P30408 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.54■□□□□ 0.88
TM4SF1P30408 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.54■□□□□ 0.88
TM4SF1P30408 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.54■□□□□ 0.88
TM4SF1P30408 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.54■□□□□ 0.88
TM4SF1P30408 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.54■□□□□ 0.88
TM4SF1P30408 AC007389.4-201ENST00000454674 793 ntBASIC20.54■□□□□ 0.88
TM4SF1P30408 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TM4SF1P30408 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.54■□□□□ 0.88
TM4SF1P30408 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.54■□□□□ 0.88
TM4SF1P30408 AC092337.1-201ENST00000568699 1129 ntBASIC20.54■□□□□ 0.88
TM4SF1P30408 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TM4SF1P30408 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF1P30408 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms