Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX1P22670 TOP3BP1-201ENST00000420768 1380 ntBASIC18.28■□□□□ 0.52
RFX1P22670 AC002310.6-201ENST00000624451 1377 ntBASIC18.28■□□□□ 0.52
RFX1P22670 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX1P22670 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX1P22670 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX1P22670 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX1P22670 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
RFX1P22670 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RFX1P22670 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX1P22670 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.27■□□□□ 0.52
RFX1P22670 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.27■□□□□ 0.52
RFX1P22670 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
RFX1P22670 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.27■□□□□ 0.52
RFX1P22670 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX1P22670 AP002472.1-201ENST00000577490 586 ntBASIC18.27■□□□□ 0.52
RFX1P22670 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.27■□□□□ 0.52
RFX1P22670 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.27■□□□□ 0.52
RFX1P22670 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.27■□□□□ 0.52
RFX1P22670 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RFX1P22670 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFX1P22670 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.27■□□□□ 0.51
RFX1P22670 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFX1P22670 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
RFX1P22670 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX1P22670 OR6D1P-203ENST00000641209 4860 ntBASIC18.26■□□□□ 0.51
RFX1P22670 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RFX1P22670 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX1P22670 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RFX1P22670 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RFX1P22670 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX1P22670 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 CRYGEP-201ENST00000412192 528 ntBASIC18.26■□□□□ 0.51
RFX1P22670 MCCD1P2-201ENST00000423228 335 ntBASIC18.26■□□□□ 0.51
RFX1P22670 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.26■□□□□ 0.51
RFX1P22670 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.26■□□□□ 0.51
RFX1P22670 AC136632.2-201ENST00000512891 861 ntBASIC18.26■□□□□ 0.51
RFX1P22670 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.26■□□□□ 0.51
RFX1P22670 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX1P22670 MIR4751-201ENST00000578027 74 ntBASIC18.26■□□□□ 0.51
RFX1P22670 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX1P22670 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.26■□□□□ 0.51
RFX1P22670 AL805961.1-202ENST00000641562 540 ntBASIC18.26■□□□□ 0.51
RFX1P22670 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
RFX1P22670 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.26■□□□□ 0.51
RFX1P22670 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RFX1P22670 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX1P22670 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RFX1P22670 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX1P22670 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
RFX1P22670 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RFX1P22670 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX1P22670 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX1P22670 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX1P22670 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX1P22670 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RFX1P22670 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
RFX1P22670 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RFX1P22670 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.25■□□□□ 0.51
RFX1P22670 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.25■□□□□ 0.51
RFX1P22670 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX1P22670 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.25■□□□□ 0.51
RFX1P22670 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms