Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.31■□□□□ 0.36
BRAFP15056 AC009078.2-202ENST00000463353 338 ntBASIC17.31■□□□□ 0.36
BRAFP15056 AC106795.1-205ENST00000512851 1056 ntBASIC17.31■□□□□ 0.36
BRAFP15056 AL160237.2-201ENST00000556165 472 ntBASIC17.31■□□□□ 0.36
BRAFP15056 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
BRAFP15056 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.31■□□□□ 0.36
BRAFP15056 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.31■□□□□ 0.36
BRAFP15056 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.31■□□□□ 0.36
BRAFP15056 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.31■□□□□ 0.36
BRAFP15056 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.31■□□□□ 0.36
BRAFP15056 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.31■□□□□ 0.36
BRAFP15056 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.31■□□□□ 0.36
BRAFP15056 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.31■□□□□ 0.36
BRAFP15056 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.31■□□□□ 0.36
BRAFP15056 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.31■□□□□ 0.36
BRAFP15056 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.31■□□□□ 0.36
BRAFP15056 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRAFP15056 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.3■□□□□ 0.36
BRAFP15056 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BRAFP15056 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BRAFP15056 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BRAFP15056 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
BRAFP15056 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
BRAFP15056 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 ABCD1P5-201ENST00000445663 754 ntBASIC17.3■□□□□ 0.36
BRAFP15056 FDX1P1-201ENST00000449115 551 ntBASIC17.3■□□□□ 0.36
BRAFP15056 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.3■□□□□ 0.36
BRAFP15056 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.3■□□□□ 0.36
BRAFP15056 IGHV3-52-201ENST00000519770 353 ntBASIC17.3■□□□□ 0.36
BRAFP15056 AP002469.2-201ENST00000531724 424 ntBASIC17.3■□□□□ 0.36
BRAFP15056 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.3■□□□□ 0.36
BRAFP15056 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 TP73-AS1-207ENST00000624167 988 ntBASIC17.3■□□□□ 0.36
BRAFP15056 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
BRAFP15056 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.3■□□□□ 0.36
BRAFP15056 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.3■□□□□ 0.36
BRAFP15056 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.3■□□□□ 0.36
BRAFP15056 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.3■□□□□ 0.36
BRAFP15056 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.3■□□□□ 0.36
BRAFP15056 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.3■□□□□ 0.36
BRAFP15056 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
BRAFP15056 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
BRAFP15056 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BRAFP15056 AP005117.1-201ENST00000584346 1413 ntBASIC17.3■□□□□ 0.36
BRAFP15056 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
BRAFP15056 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.29■□□□□ 0.36
BRAFP15056 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
BRAFP15056 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
BRAFP15056 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.29■□□□□ 0.36
BRAFP15056 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.29■□□□□ 0.36
BRAFP15056 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.29■□□□□ 0.36
BRAFP15056 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.29■□□□□ 0.36
BRAFP15056 AC122714.2-201ENST00000502787 707 ntBASIC17.29■□□□□ 0.36
BRAFP15056 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.29■□□□□ 0.36
BRAFP15056 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.29■□□□□ 0.36
BRAFP15056 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.29■□□□□ 0.36
BRAFP15056 AC008608.2-201ENST00000606089 416 ntBASIC17.29■□□□□ 0.36
BRAFP15056 AL355877.3-201ENST00000622820 899 ntBASIC17.29■□□□□ 0.36
BRAFP15056 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
BRAFP15056 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.29■□□□□ 0.36
BRAFP15056 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 AC024909.3-201ENST00000611513 2257 ntBASIC17.29■□□□□ 0.36
BRAFP15056 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.29■□□□□ 0.36
BRAFP15056 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BRAFP15056 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.29■□□□□ 0.36
BRAFP15056 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.29■□□□□ 0.36
BRAFP15056 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.29■□□□□ 0.36
BRAFP15056 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms