Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC004233.3-201ENST00000607794 1269 ntBASIC17.25■□□□□ 0.35
RHOP08100 TEX28P1-201ENST00000613479 1221 ntBASIC17.25■□□□□ 0.35
RHOP08100 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 TEX28P2-201ENST00000617764 1221 ntBASIC17.25■□□□□ 0.35
RHOP08100 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RHOP08100 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.25■□□□□ 0.35
RHOP08100 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.25■□□□□ 0.35
RHOP08100 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.25■□□□□ 0.35
RHOP08100 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RHOP08100 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.25■□□□□ 0.35
RHOP08100 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RHOP08100 SNX33P1-201ENST00000592116 1762 ntBASIC17.25■□□□□ 0.35
RHOP08100 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHOP08100 AC007613.1-201ENST00000572811 2597 ntBASIC17.25■□□□□ 0.35
RHOP08100 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.25■□□□□ 0.35
RHOP08100 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RHOP08100 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.24■□□□□ 0.35
RHOP08100 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RHOP08100 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.24■□□□□ 0.35
RHOP08100 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 CETN4P-206ENST00000642099 2168 ntBASIC17.24■□□□□ 0.35
RHOP08100 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.24■□□□□ 0.35
RHOP08100 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.24■□□□□ 0.35
RHOP08100 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RHOP08100 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
RHOP08100 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.24■□□□□ 0.35
RHOP08100 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.24■□□□□ 0.35
RHOP08100 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RHOP08100 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 SPTLC1P1-201ENST00000447199 261 ntBASIC17.24■□□□□ 0.35
RHOP08100 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.24■□□□□ 0.35
RHOP08100 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.24■□□□□ 0.35
RHOP08100 RNA5SP410-201ENST00000516285 106 ntBASIC17.24■□□□□ 0.35
RHOP08100 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.24■□□□□ 0.35
RHOP08100 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.24■□□□□ 0.35
RHOP08100 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.24■□□□□ 0.35
RHOP08100 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.24■□□□□ 0.35
RHOP08100 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.24■□□□□ 0.35
RHOP08100 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.24■□□□□ 0.35
RHOP08100 AC025048.6-201ENST00000634326 1161 ntBASIC17.24■□□□□ 0.35
RHOP08100 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.24■□□□□ 0.35
RHOP08100 AL358472.5-202ENST00000641448 1267 ntBASIC17.24■□□□□ 0.35
RHOP08100 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
RHOP08100 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RHOP08100 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RHOP08100 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
RHOP08100 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHOP08100 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.23■□□□□ 0.35
RHOP08100 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RHOP08100 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.23■□□□□ 0.35
RHOP08100 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RHOP08100 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RHOP08100 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 RPL37AP1-201ENST00000412502 279 ntBASIC17.23■□□□□ 0.35
RHOP08100 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 AC009477.1-201ENST00000452936 217 ntBASIC17.23■□□□□ 0.35
RHOP08100 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.23■□□□□ 0.35
RHOP08100 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.23■□□□□ 0.35
RHOP08100 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.23■□□□□ 0.35
RHOP08100 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.23■□□□□ 0.35
RHOP08100 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.23■□□□□ 0.35
RHOP08100 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.23■□□□□ 0.35
RHOP08100 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.23■□□□□ 0.35
RHOP08100 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RHOP08100 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RHOP08100 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.23■□□□□ 0.35
RHOP08100 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.23■□□□□ 0.35
RHOP08100 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.23■□□□□ 0.35
RHOP08100 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.23■□□□□ 0.35
RHOP08100 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RHOP08100 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms