Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
MT-ND3P03897 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.15■□□□□ 0.34
MT-ND3P03897 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.15■□□□□ 0.34
MT-ND3P03897 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.15■□□□□ 0.34
MT-ND3P03897 AL138831.2-201ENST00000606564 490 ntBASIC17.15■□□□□ 0.34
MT-ND3P03897 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.15■□□□□ 0.34
MT-ND3P03897 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
MT-ND3P03897 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.14■□□□□ 0.34
MT-ND3P03897 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.14■□□□□ 0.33
MT-ND3P03897 AL353593.2-201ENST00000602529 1483 ntBASIC17.14■□□□□ 0.33
MT-ND3P03897 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.14■□□□□ 0.33
MT-ND3P03897 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.14■□□□□ 0.33
MT-ND3P03897 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.14■□□□□ 0.33
MT-ND3P03897 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.14■□□□□ 0.33
MT-ND3P03897 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.14■□□□□ 0.33
MT-ND3P03897 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
MT-ND3P03897 AC096582.2-201ENST00000510860 516 ntBASIC17.14■□□□□ 0.33
MT-ND3P03897 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 MIR5100-201ENST00000579544 119 ntBASIC17.14■□□□□ 0.33
MT-ND3P03897 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 AC114341.1-201ENST00000618070 349 ntBASIC17.14■□□□□ 0.33
MT-ND3P03897 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.14■□□□□ 0.33
MT-ND3P03897 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
MT-ND3P03897 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 AC007950.2-201ENST00000615045 2347 ntBASIC17.14■□□□□ 0.33
MT-ND3P03897 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
MT-ND3P03897 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-ND3P03897 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.13■□□□□ 0.33
MT-ND3P03897 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.13■□□□□ 0.33
MT-ND3P03897 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.13■□□□□ 0.33
MT-ND3P03897 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 AKR1C7P-201ENST00000305623 895 ntBASIC17.13■□□□□ 0.33
MT-ND3P03897 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.13■□□□□ 0.33
MT-ND3P03897 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.13■□□□□ 0.33
MT-ND3P03897 AC091607.1-201ENST00000490318 1060 ntBASIC17.13■□□□□ 0.33
MT-ND3P03897 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 AC009533.2-201ENST00000543664 586 ntBASIC17.13■□□□□ 0.33
MT-ND3P03897 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 SLC25A6P4-201ENST00000586535 553 ntBASIC17.13■□□□□ 0.33
MT-ND3P03897 BNIP3P18-201ENST00000593976 575 ntBASIC17.13■□□□□ 0.33
MT-ND3P03897 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.13■□□□□ 0.33
MT-ND3P03897 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.13■□□□□ 0.33
MT-ND3P03897 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MT-ND3P03897 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 ALOX12P2-203ENST00000570921 1945 ntBASIC17.13■□□□□ 0.33
MT-ND3P03897 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND3P03897 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MT-ND3P03897 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND3P03897 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms