Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 FRMD8P1-201ENST00000440433 1524 ntBASIC13.33□□□□□ -0.28
IFNA1P01562 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.33□□□□□ -0.28
IFNA1P01562 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
IFNA1P01562 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
IFNA1P01562 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
IFNA1P01562 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 ST20-AS1-201ENST00000560255 4223 ntBASIC13.32□□□□□ -0.28
IFNA1P01562 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
IFNA1P01562 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.32□□□□□ -0.28
IFNA1P01562 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.32□□□□□ -0.28
IFNA1P01562 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
IFNA1P01562 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.32□□□□□ -0.28
IFNA1P01562 GPR89P-201ENST00000407924 1495 ntBASIC13.32□□□□□ -0.28
IFNA1P01562 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 AL645728.1-201ENST00000366221 2101 ntBASIC13.32□□□□□ -0.28
IFNA1P01562 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.32□□□□□ -0.28
IFNA1P01562 AC098934.4-201ENST00000564127 592 ntBASIC13.32□□□□□ -0.28
IFNA1P01562 RARRES2P6-201ENST00000567333 442 ntBASIC13.32□□□□□ -0.28
IFNA1P01562 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.32□□□□□ -0.28
IFNA1P01562 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
IFNA1P01562 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.32□□□□□ -0.28
IFNA1P01562 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.32□□□□□ -0.28
IFNA1P01562 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.32□□□□□ -0.28
IFNA1P01562 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.32□□□□□ -0.28
IFNA1P01562 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.32□□□□□ -0.28
IFNA1P01562 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
IFNA1P01562 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
IFNA1P01562 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
IFNA1P01562 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
IFNA1P01562 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IFNA1P01562 AC002310.6-201ENST00000624451 1377 ntBASIC13.32□□□□□ -0.28
IFNA1P01562 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
IFNA1P01562 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
IFNA1P01562 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
IFNA1P01562 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.31□□□□□ -0.28
IFNA1P01562 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.31□□□□□ -0.28
IFNA1P01562 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.31□□□□□ -0.28
IFNA1P01562 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.31□□□□□ -0.28
IFNA1P01562 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.31□□□□□ -0.28
IFNA1P01562 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.31□□□□□ -0.28
IFNA1P01562 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
IFNA1P01562 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.31□□□□□ -0.28
IFNA1P01562 PVRIG2P-201ENST00000435460 978 ntBASIC13.31□□□□□ -0.28
IFNA1P01562 AP003041.3-201ENST00000527151 707 ntBASIC13.31□□□□□ -0.28
IFNA1P01562 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.31□□□□□ -0.28
IFNA1P01562 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.31□□□□□ -0.28
IFNA1P01562 AC233263.1-201ENST00000578059 224 ntBASIC13.31□□□□□ -0.28
IFNA1P01562 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.31□□□□□ -0.28
IFNA1P01562 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.31□□□□□ -0.28
IFNA1P01562 AC092865.7-201ENST00000641832 219 ntBASIC13.31□□□□□ -0.28
IFNA1P01562 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.31□□□□□ -0.28
IFNA1P01562 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
IFNA1P01562 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.31□□□□□ -0.28
IFNA1P01562 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
IFNA1P01562 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.31□□□□□ -0.28
IFNA1P01562 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IFNA1P01562 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms