Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MBD3O95983 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.27■□□□□ 0.68
MBD3O95983 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
MBD3O95983 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
MBD3O95983 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
MBD3O95983 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.27■□□□□ 0.68
MBD3O95983 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.27■□□□□ 0.68
MBD3O95983 AC011840.4-201ENST00000578471 627 ntBASIC19.27■□□□□ 0.68
MBD3O95983 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.27■□□□□ 0.68
MBD3O95983 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.27■□□□□ 0.68
MBD3O95983 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3O95983 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.27■□□□□ 0.68
MBD3O95983 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
MBD3O95983 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.27■□□□□ 0.67
MBD3O95983 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.27■□□□□ 0.67
MBD3O95983 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MBD3O95983 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
MBD3O95983 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.26■□□□□ 0.67
MBD3O95983 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
MBD3O95983 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.26■□□□□ 0.67
MBD3O95983 AC099063.4-201ENST00000641099 1602 ntBASIC19.26■□□□□ 0.67
MBD3O95983 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.26■□□□□ 0.67
MBD3O95983 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.26■□□□□ 0.67
MBD3O95983 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
MBD3O95983 KRT18P38-201ENST00000449496 1282 ntBASIC19.26■□□□□ 0.67
MBD3O95983 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.26■□□□□ 0.67
MBD3O95983 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.26■□□□□ 0.67
MBD3O95983 AC139887.4-201ENST00000607877 719 ntBASIC19.26■□□□□ 0.67
MBD3O95983 AC124864.1-201ENST00000623408 392 ntBASIC19.26■□□□□ 0.67
MBD3O95983 AP006294.2-201ENST00000641667 209 ntBASIC19.26■□□□□ 0.67
MBD3O95983 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
MBD3O95983 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.26■□□□□ 0.67
MBD3O95983 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
MBD3O95983 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MBD3O95983 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3O95983 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MBD3O95983 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.26■□□□□ 0.67
MBD3O95983 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD3O95983 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MBD3O95983 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.25■□□□□ 0.67
MBD3O95983 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MBD3O95983 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD3O95983 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MBD3O95983 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
MBD3O95983 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 BX664615.1-201ENST00000443558 458 ntBASIC19.25■□□□□ 0.67
MBD3O95983 AC112907.2-201ENST00000448639 330 ntBASIC19.25■□□□□ 0.67
MBD3O95983 HOMER2P1-201ENST00000455653 964 ntBASIC19.25■□□□□ 0.67
MBD3O95983 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 AC011467.2-201ENST00000598425 242 ntBASIC19.25■□□□□ 0.67
MBD3O95983 HYMAI.1-201ENST00000620949 238 ntBASIC19.25■□□□□ 0.67
MBD3O95983 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD3O95983 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.25■□□□□ 0.67
MBD3O95983 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD3O95983 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD3O95983 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3O95983 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms