Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.89■□□□□ 0.29
VAPBO95292 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAPBO95292 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VAPBO95292 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VAPBO95292 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.88■□□□□ 0.29
VAPBO95292 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.88■□□□□ 0.29
VAPBO95292 AC073621.1-201ENST00000392730 636 ntBASIC16.88■□□□□ 0.29
VAPBO95292 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.88■□□□□ 0.29
VAPBO95292 FAM197Y8-203ENST00000450145 560 ntBASIC16.88■□□□□ 0.29
VAPBO95292 HLA-J-202ENST00000469281 1241 ntBASIC16.88■□□□□ 0.29
VAPBO95292 SLC25A6P2-201ENST00000497974 877 ntBASIC16.88■□□□□ 0.29
VAPBO95292 AL121912.1-201ENST00000603683 238 ntBASIC16.88■□□□□ 0.29
VAPBO95292 REXO1L3P-201ENST00000622202 1288 ntBASIC16.88■□□□□ 0.29
VAPBO95292 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VAPBO95292 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
VAPBO95292 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.88■□□□□ 0.29
VAPBO95292 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPBO95292 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPBO95292 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPBO95292 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.87■□□□□ 0.29
VAPBO95292 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPBO95292 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPBO95292 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.87■□□□□ 0.29
VAPBO95292 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VAPBO95292 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 AC136632.2-201ENST00000512891 861 ntBASIC16.87■□□□□ 0.29
VAPBO95292 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.87■□□□□ 0.29
VAPBO95292 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.87■□□□□ 0.29
VAPBO95292 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.87■□□□□ 0.29
VAPBO95292 MPDU1-223ENST00000582151 728 ntBASIC16.87■□□□□ 0.29
VAPBO95292 AL139011.1-202ENST00000642063 584 ntBASIC16.87■□□□□ 0.29
VAPBO95292 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPBO95292 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPBO95292 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.87■□□□□ 0.29
VAPBO95292 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VAPBO95292 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPBO95292 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
VAPBO95292 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPBO95292 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.86■□□□□ 0.29
VAPBO95292 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.86■□□□□ 0.29
VAPBO95292 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
VAPBO95292 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.86■□□□□ 0.29
VAPBO95292 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VAPBO95292 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
VAPBO95292 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.86■□□□□ 0.29
VAPBO95292 HNRNPDP1-201ENST00000439535 754 ntBASIC16.86■□□□□ 0.29
VAPBO95292 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
VAPBO95292 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 AC008735.5-201ENST00000623544 497 ntBASIC16.86■□□□□ 0.29
VAPBO95292 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.86■□□□□ 0.29
VAPBO95292 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.86■□□□□ 0.29
VAPBO95292 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.86■□□□□ 0.29
VAPBO95292 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.86■□□□□ 0.29
VAPBO95292 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
VAPBO95292 AC008741.2-201ENST00000612792 3115 ntBASIC16.86■□□□□ 0.29
VAPBO95292 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPBO95292 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.86■□□□□ 0.29
VAPBO95292 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms