Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.97□□□□□ -0.01
PFDN1O60925 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.97□□□□□ -0.01
PFDN1O60925 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.97□□□□□ -0.01
PFDN1O60925 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.97□□□□□ -0.01
PFDN1O60925 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.97□□□□□ -0.01
PFDN1O60925 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.97□□□□□ -0.01
PFDN1O60925 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.97□□□□□ -0.01
PFDN1O60925 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PFDN1O60925 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PFDN1O60925 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.97□□□□□ -0.01
PFDN1O60925 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.97□□□□□ -0.01
PFDN1O60925 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
PFDN1O60925 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 C2orf69P4-201ENST00000565394 541 ntBASIC14.97□□□□□ -0.01
PFDN1O60925 AL162412.1-201ENST00000567129 965 ntBASIC14.97□□□□□ -0.01
PFDN1O60925 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.97□□□□□ -0.01
PFDN1O60925 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PFDN1O60925 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PFDN1O60925 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.97□□□□□ -0.01
PFDN1O60925 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.97□□□□□ -0.01
PFDN1O60925 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
PFDN1O60925 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 AL391256.1-201ENST00000443260 1855 ntBASIC14.97□□□□□ -0.01
PFDN1O60925 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.97□□□□□ -0.01
PFDN1O60925 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.97□□□□□ -0.01
PFDN1O60925 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PFDN1O60925 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PFDN1O60925 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PFDN1O60925 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.96□□□□□ -0.01
PFDN1O60925 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
PFDN1O60925 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PFDN1O60925 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.96□□□□□ -0.01
PFDN1O60925 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PFDN1O60925 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PFDN1O60925 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.96□□□□□ -0.01
PFDN1O60925 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 AC136621.1-201ENST00000624017 2304 ntBASIC14.96□□□□□ -0.01
PFDN1O60925 AL035685.1-201ENST00000636663 812 ntBASIC14.96□□□□□ -0.01
PFDN1O60925 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.96□□□□□ -0.01
PFDN1O60925 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.96□□□□□ -0.01
PFDN1O60925 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.96□□□□□ -0.01
PFDN1O60925 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.96□□□□□ -0.01
PFDN1O60925 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PFDN1O60925 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
PFDN1O60925 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
PFDN1O60925 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PFDN1O60925 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.96□□□□□ -0.02
PFDN1O60925 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PFDN1O60925 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
PFDN1O60925 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PFDN1O60925 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PFDN1O60925 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.96□□□□□ -0.02
PFDN1O60925 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PFDN1O60925 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
PFDN1O60925 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms