Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PCDHA12-202ENST00000613593 2588 ntBASIC16.96■□□□□ 0.31
KDELR3O43731 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.96■□□□□ 0.31
KDELR3O43731 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 AC211486.1-202ENST00000416371 468 ntBASIC16.96■□□□□ 0.31
KDELR3O43731 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.96■□□□□ 0.31
KDELR3O43731 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
KDELR3O43731 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.96■□□□□ 0.31
KDELR3O43731 AC211476.1-201ENST00000503899 468 ntBASIC16.96■□□□□ 0.31
KDELR3O43731 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.96■□□□□ 0.31
KDELR3O43731 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.96■□□□□ 0.31
KDELR3O43731 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.96■□□□□ 0.31
KDELR3O43731 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.96■□□□□ 0.31
KDELR3O43731 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 FLJ38576-201ENST00000623820 2459 ntBASIC16.96■□□□□ 0.31
KDELR3O43731 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
KDELR3O43731 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KDELR3O43731 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.96■□□□□ 0.3
KDELR3O43731 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
KDELR3O43731 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KDELR3O43731 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.96■□□□□ 0.3
KDELR3O43731 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.96■□□□□ 0.3
KDELR3O43731 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
KDELR3O43731 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 AL031731.1-201ENST00000642131 2094 ntBASIC16.95■□□□□ 0.3
KDELR3O43731 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
KDELR3O43731 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
KDELR3O43731 TFAMP1-201ENST00000412727 736 ntBASIC16.95■□□□□ 0.3
KDELR3O43731 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
KDELR3O43731 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
KDELR3O43731 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.95■□□□□ 0.3
KDELR3O43731 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.95■□□□□ 0.3
KDELR3O43731 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 AC026120.1-201ENST00000611536 926 ntBASIC16.95■□□□□ 0.3
KDELR3O43731 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
KDELR3O43731 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
KDELR3O43731 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
KDELR3O43731 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
KDELR3O43731 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.95■□□□□ 0.3
KDELR3O43731 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
KDELR3O43731 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.95■□□□□ 0.3
KDELR3O43731 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
KDELR3O43731 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KDELR3O43731 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 AC016027.1-202ENST00000607927 1699 ntBASIC16.94■□□□□ 0.3
KDELR3O43731 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.94■□□□□ 0.3
KDELR3O43731 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.94■□□□□ 0.3
KDELR3O43731 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.94■□□□□ 0.3
KDELR3O43731 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.94■□□□□ 0.3
KDELR3O43731 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.94■□□□□ 0.3
KDELR3O43731 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.94■□□□□ 0.3
KDELR3O43731 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.94■□□□□ 0.3
KDELR3O43731 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.94■□□□□ 0.3
KDELR3O43731 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.94■□□□□ 0.3
KDELR3O43731 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms