Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
COCHO43405 MIR770-201ENST00000390219 98 ntBASIC17.25■□□□□ 0.35
COCHO43405 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.25■□□□□ 0.35
COCHO43405 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.25■□□□□ 0.35
COCHO43405 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.25■□□□□ 0.35
COCHO43405 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 AC105233.2-201ENST00000523697 349 ntBASIC17.25■□□□□ 0.35
COCHO43405 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 AF228730.5-201ENST00000530288 346 ntBASIC17.25■□□□□ 0.35
COCHO43405 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.25■□□□□ 0.35
COCHO43405 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.25■□□□□ 0.35
COCHO43405 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.25■□□□□ 0.35
COCHO43405 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.25■□□□□ 0.35
COCHO43405 AC073389.1-201ENST00000595595 795 ntBASIC17.25■□□□□ 0.35
COCHO43405 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.25■□□□□ 0.35
COCHO43405 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.25■□□□□ 0.35
COCHO43405 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COCHO43405 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COCHO43405 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
COCHO43405 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
COCHO43405 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 AC008677.1-201ENST00000519230 1561 ntBASIC17.24■□□□□ 0.35
COCHO43405 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
COCHO43405 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.24■□□□□ 0.35
COCHO43405 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.24■□□□□ 0.35
COCHO43405 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.24■□□□□ 0.35
COCHO43405 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.24■□□□□ 0.35
COCHO43405 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.24■□□□□ 0.35
COCHO43405 AC067863.1-201ENST00000494933 530 ntBASIC17.24■□□□□ 0.35
COCHO43405 PRYP6-201ENST00000514804 343 ntBASIC17.24■□□□□ 0.35
COCHO43405 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.24■□□□□ 0.35
COCHO43405 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.24■□□□□ 0.35
COCHO43405 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.24■□□□□ 0.35
COCHO43405 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.24■□□□□ 0.35
COCHO43405 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.24■□□□□ 0.35
COCHO43405 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.24■□□□□ 0.35
COCHO43405 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.24■□□□□ 0.35
COCHO43405 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.24■□□□□ 0.35
COCHO43405 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COCHO43405 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COCHO43405 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 TUBB3P1-201ENST00000405796 1332 ntBASIC17.23■□□□□ 0.35
COCHO43405 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.23■□□□□ 0.35
COCHO43405 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COCHO43405 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 AC012313.1-201ENST00000593393 3059 ntBASIC17.23■□□□□ 0.35
COCHO43405 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COCHO43405 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
COCHO43405 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.23■□□□□ 0.35
COCHO43405 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.23■□□□□ 0.35
COCHO43405 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.23■□□□□ 0.35
COCHO43405 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.23■□□□□ 0.35
COCHO43405 DUX4L27-201ENST00000554796 1261 ntBASIC17.23■□□□□ 0.35
COCHO43405 AC051619.7-201ENST00000568314 623 ntBASIC17.23■□□□□ 0.35
COCHO43405 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.23■□□□□ 0.35
COCHO43405 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.23■□□□□ 0.35
COCHO43405 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 OR6D1P-202ENST00000641007 5290 ntBASIC17.23■□□□□ 0.35
COCHO43405 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 AL603756.1-201ENST00000606511 2163 ntBASIC17.23■□□□□ 0.35
COCHO43405 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.23■□□□□ 0.35
COCHO43405 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.23■□□□□ 0.35
COCHO43405 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COCHO43405 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.23■□□□□ 0.35
COCHO43405 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms