Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN9O14815 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CAPN9O14815 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CAPN9O14815 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN9O14815 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CAPN9O14815 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN9O14815 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN9O14815 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN9O14815 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CAPN9O14815 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.74■□□□□ 0.43
CAPN9O14815 MIR940-201ENST00000401276 94 ntBASIC17.74■□□□□ 0.43
CAPN9O14815 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.74■□□□□ 0.43
CAPN9O14815 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CAPN9O14815 MED15P5-201ENST00000423150 992 ntBASIC17.74■□□□□ 0.43
CAPN9O14815 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN9O14815 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN9O14815 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.74■□□□□ 0.43
CAPN9O14815 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.74■□□□□ 0.43
CAPN9O14815 AC064836.3-201ENST00000607928 673 ntBASIC17.74■□□□□ 0.43
CAPN9O14815 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN9O14815 TOP3BP1-201ENST00000420768 1380 ntBASIC17.74■□□□□ 0.43
CAPN9O14815 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN9O14815 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.73■□□□□ 0.43
CAPN9O14815 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CAPN9O14815 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 KRT8P49-201ENST00000604166 1432 ntBASIC17.73■□□□□ 0.43
CAPN9O14815 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
CAPN9O14815 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CAPN9O14815 MIR1233-2-201ENST00000408138 82 ntBASIC17.73■□□□□ 0.43
CAPN9O14815 MIR1233-1-201ENST00000408722 82 ntBASIC17.73■□□□□ 0.43
CAPN9O14815 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CAPN9O14815 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.73■□□□□ 0.43
CAPN9O14815 AL591424.1-201ENST00000442569 1213 ntBASIC17.73■□□□□ 0.43
CAPN9O14815 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.73■□□□□ 0.43
CAPN9O14815 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CAPN9O14815 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.73■□□□□ 0.43
CAPN9O14815 CXCL1P1-201ENST00000502804 216 ntBASIC17.73■□□□□ 0.43
CAPN9O14815 RNA5SP416-201ENST00000516838 111 ntBASIC17.73■□□□□ 0.43
CAPN9O14815 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.73■□□□□ 0.43
CAPN9O14815 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.73■□□□□ 0.43
CAPN9O14815 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.73■□□□□ 0.43
CAPN9O14815 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.73■□□□□ 0.43
CAPN9O14815 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CAPN9O14815 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN9O14815 AL162727.3-201ENST00000635661 2787 ntBASIC17.73■□□□□ 0.43
CAPN9O14815 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.73■□□□□ 0.43
CAPN9O14815 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
CAPN9O14815 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.72■□□□□ 0.43
CAPN9O14815 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN9O14815 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CAPN9O14815 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN9O14815 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN9O14815 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.72■□□□□ 0.43
CAPN9O14815 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN9O14815 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms