Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDLIM1O00151 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.03■□□□□ 0.16
PDLIM1O00151 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.03■□□□□ 0.16
PDLIM1O00151 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.03■□□□□ 0.16
PDLIM1O00151 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.03■□□□□ 0.16
PDLIM1O00151 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.03■□□□□ 0.16
PDLIM1O00151 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.03■□□□□ 0.16
PDLIM1O00151 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.03■□□□□ 0.16
PDLIM1O00151 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.03■□□□□ 0.16
PDLIM1O00151 AC005332.3-201ENST00000589904 676 ntBASIC16.03■□□□□ 0.16
PDLIM1O00151 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.03■□□□□ 0.16
PDLIM1O00151 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PDLIM1O00151 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.03■□□□□ 0.16
PDLIM1O00151 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PDLIM1O00151 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PDLIM1O00151 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDLIM1O00151 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.03■□□□□ 0.16
PDLIM1O00151 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.03■□□□□ 0.16
PDLIM1O00151 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PDLIM1O00151 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PDLIM1O00151 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PDLIM1O00151 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 AL359183.1-201ENST00000623796 2132 ntBASIC16.03■□□□□ 0.16
PDLIM1O00151 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.03■□□□□ 0.16
PDLIM1O00151 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM1O00151 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM1O00151 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM1O00151 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM1O00151 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.02■□□□□ 0.16
PDLIM1O00151 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.02■□□□□ 0.16
PDLIM1O00151 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM1O00151 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM1O00151 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC16.02■□□□□ 0.16
PDLIM1O00151 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.02■□□□□ 0.16
PDLIM1O00151 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM1O00151 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PDLIM1O00151 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM1O00151 AL391256.1-201ENST00000443260 1855 ntBASIC16.02■□□□□ 0.16
PDLIM1O00151 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM1O00151 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.02■□□□□ 0.16
PDLIM1O00151 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.02■□□□□ 0.16
PDLIM1O00151 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.02■□□□□ 0.16
PDLIM1O00151 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.02■□□□□ 0.16
PDLIM1O00151 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PDLIM1O00151 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.02■□□□□ 0.16
PDLIM1O00151 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.02■□□□□ 0.16
PDLIM1O00151 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PDLIM1O00151 GPR32P1-201ENST00000601788 811 ntBASIC16.02■□□□□ 0.16
PDLIM1O00151 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.02■□□□□ 0.16
PDLIM1O00151 AC009154.2-201ENST00000621177 724 ntBASIC16.02■□□□□ 0.16
PDLIM1O00151 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PDLIM1O00151 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM1O00151 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM1O00151 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.02■□□□□ 0.15
PDLIM1O00151 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM1O00151 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM1O00151 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
PDLIM1O00151 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.02■□□□□ 0.15
PDLIM1O00151 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM1O00151 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM1O00151 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
PDLIM1O00151 AC022532.1-201ENST00000624563 1728 ntBASIC16.02■□□□□ 0.15
PDLIM1O00151 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.02■□□□□ 0.15
PDLIM1O00151 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM1O00151 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM1O00151 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM1O00151 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PDLIM1O00151 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
PDLIM1O00151 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.02■□□□□ 0.15
PDLIM1O00151 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM1O00151 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.02■□□□□ 0.15
PDLIM1O00151 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM1O00151 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PDLIM1O00151 AL645728.1-201ENST00000366221 2101 ntBASIC16.01■□□□□ 0.15
PDLIM1O00151 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms