Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 RARRES2P8-201ENST00000566335 367 ntBASIC18.84■□□□□ 0.61
DDX39AO00148 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.84■□□□□ 0.61
DDX39AO00148 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX39AO00148 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DDX39AO00148 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 AC006277.1-201ENST00000624348 1610 ntBASIC18.84■□□□□ 0.61
DDX39AO00148 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX39AO00148 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX39AO00148 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX39AO00148 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX39AO00148 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DDX39AO00148 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX39AO00148 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
DDX39AO00148 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX39AO00148 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
DDX39AO00148 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
DDX39AO00148 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
DDX39AO00148 KRT18P28-201ENST00000453838 1332 ntBASIC18.83■□□□□ 0.61
DDX39AO00148 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DDX39AO00148 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 AC092474.2-201ENST00000424288 719 ntBASIC18.83■□□□□ 0.6
DDX39AO00148 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.83■□□□□ 0.6
DDX39AO00148 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.83■□□□□ 0.6
DDX39AO00148 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.83■□□□□ 0.6
DDX39AO00148 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
DDX39AO00148 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 AL391256.1-201ENST00000443260 1855 ntBASIC18.83■□□□□ 0.6
DDX39AO00148 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
DDX39AO00148 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.83■□□□□ 0.6
DDX39AO00148 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.83■□□□□ 0.6
DDX39AO00148 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.83■□□□□ 0.6
DDX39AO00148 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.83■□□□□ 0.6
DDX39AO00148 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX39AO00148 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX39AO00148 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX39AO00148 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX39AO00148 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX39AO00148 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
DDX39AO00148 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.82■□□□□ 0.6
DDX39AO00148 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.82■□□□□ 0.6
DDX39AO00148 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX39AO00148 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX39AO00148 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.82■□□□□ 0.6
DDX39AO00148 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DDX39AO00148 AC004835.2-201ENST00000603762 682 ntBASIC18.82■□□□□ 0.6
DDX39AO00148 AL161645.1-201ENST00000622716 1255 ntBASIC18.82■□□□□ 0.6
DDX39AO00148 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX39AO00148 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DDX39AO00148 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX39AO00148 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DDX39AO00148 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
DDX39AO00148 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX39AO00148 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX39AO00148 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX39AO00148 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.82■□□□□ 0.6
DDX39AO00148 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX39AO00148 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DDX39AO00148 AC016027.1-202ENST00000607927 1699 ntBASIC18.82■□□□□ 0.6
DDX39AO00148 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX39AO00148 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX39AO00148 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DDX39AO00148 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
DDX39AO00148 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX39AO00148 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
DDX39AO00148 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX39AO00148 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DDX39AO00148 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
DDX39AO00148 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX39AO00148 AC079140.1-201ENST00000508039 487 ntBASIC18.81■□□□□ 0.6
DDX39AO00148 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.81■□□□□ 0.6
DDX39AO00148 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX39AO00148 AC109635.5-201ENST00000533593 962 ntBASIC18.81■□□□□ 0.6
DDX39AO00148 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX39AO00148 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX39AO00148 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms