Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L3A6NE82 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 AC060834.1-201ENST00000443027 2032 ntBASIC14.63□□□□□ -0.07
MBD3L3A6NE82 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 AC073592.8-201ENST00000624126 511 ntBASIC14.63□□□□□ -0.07
MBD3L3A6NE82 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 OR6D1P-202ENST00000641007 5290 ntBASIC14.63□□□□□ -0.07
MBD3L3A6NE82 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 AL512652.2-201ENST00000625156 1716 ntBASIC14.63□□□□□ -0.07
MBD3L3A6NE82 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MBD3L3A6NE82 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 AL035456.1-201ENST00000456064 1369 ntBASIC14.62□□□□□ -0.07
MBD3L3A6NE82 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.62□□□□□ -0.07
MBD3L3A6NE82 AL353705.2-201ENST00000428243 662 ntBASIC14.62□□□□□ -0.07
MBD3L3A6NE82 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.62□□□□□ -0.07
MBD3L3A6NE82 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MBD3L3A6NE82 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms