Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CRYGEP-201ENST00000412192 528 ntBASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ELK2BP-201ENST00000415014 1224 ntBASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MIR4751-201ENST00000578027 74 ntBASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC078925.2-201ENST00000624013 1973 ntBASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 EGFEM1P-202ENST00000431685 1563 ntBASIC13.54□□□□□ -0.24
TCRBV4S1A1TA0A5B7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 DOC2GP-204ENST00000639052 2548 ntBASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC092068.3-201ENST00000587894 2016 ntBASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 DNAJB3-201ENST00000446806 729 ntBASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PGAM5P1-201ENST00000518923 814 ntBASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AL139424.1-201ENST00000607572 797 ntBASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 AC064836.3-201ENST00000607928 673 ntBASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TCRBV4S1A1TA0A5B7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TCRBV4S1A1TA0A5B7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TCRBV4S1A1TA0A5B7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.52□□□□□ -0.24
TCRBV4S1A1TA0A5B7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
TCRBV4S1A1TA0A5B7 RNF216P1-203ENST00000404404 2427 ntBASIC13.52□□□□□ -0.24
TCRBV4S1A1TA0A5B7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TCRBV4S1A1TA0A5B7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 RPS15P9-201ENST00000494093 319 ntBASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC002347.1-201ENST00000569543 541 ntBASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms