Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 AL591122.2-201ENST00000624125 1853 ntBASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 YBX1P10-201ENST00000444752 975 ntBASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 SDHAP2-201ENST00000455183 2001 ntBASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
LINC01558Q9Y6Z2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 AL928921.2-201ENST00000641325 2442 ntBASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LINC01558Q9Y6Z2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms