Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 MIR940-201ENST00000401276 94 ntBASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 MED15P5-201ENST00000423150 992 ntBASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 AP000347.1-202ENST00000435868 847 ntBASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 MIR574-201ENST00000385209 96 ntBASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 AC007967.2-201ENST00000432613 625 ntBASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 RNA5SP416-201ENST00000516838 111 ntBASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 FAM197Y3-203ENST00000618346 717 ntBASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 AC129492.6-201ENST00000611383 1305 ntBASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CLCA3PQ9Y6N3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AL021920.2-201ENST00000624828 1351 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms