Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHB1Q9Y5F3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHB1Q9Y5F3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 MIR770-201ENST00000390219 98 ntBASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 AC010507.1-201ENST00000633895 436 ntBASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB1Q9Y5F3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 AL391256.1-201ENST00000443260 1855 ntBASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB1Q9Y5F3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 AL645728.1-201ENST00000366221 2101 ntBASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 RNF216P1-203ENST00000404404 2427 ntBASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms