Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 AL035456.1-201ENST00000456064 1369 ntBASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 MRPS18AP1-201ENST00000414458 589 ntBASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 AL353705.2-201ENST00000428243 662 ntBASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 NEFHP1-201ENST00000412845 2629 ntBASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB7Q9Y5E2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHB7Q9Y5E2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHB7Q9Y5E2 AC022144.1-201ENST00000602255 1580 ntBASIC17.96■□□□□ 0.46
PCDHB7Q9Y5E2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.96■□□□□ 0.46
PCDHB7Q9Y5E2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 PIN1P1-201ENST00000412108 996 ntBASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 TSSK5P-201ENST00000423978 907 ntBASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 CRB3P1-201ENST00000449338 276 ntBASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 HLA-V-204ENST00000476601 1289 ntBASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 CROCCP2-202ENST00000412962 2773 ntBASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB7Q9Y5E2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 AC006277.1-201ENST00000624348 1610 ntBASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 AC073439.1-201ENST00000624121 1774 ntBASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 FOXO1B-201ENST00000504678 1527 ntBASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB7Q9Y5E2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms